Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six2Q62232 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.28■□□□□ 0.68
Six2Q62232 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six2Q62232 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six2Q62232 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six2Q62232 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six2Q62232 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.27■□□□□ 0.68
Six2Q62232 Gm15039-201ENSMUST00000118914 875 ntBASIC19.27■□□□□ 0.68
Six2Q62232 Gm44549-201ENSMUST00000208351 577 ntBASIC19.27■□□□□ 0.68
Six2Q62232 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six2Q62232 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Six2Q62232 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.27■□□□□ 0.68
Six2Q62232 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six2Q62232 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Six2Q62232 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.27■□□□□ 0.68
Six2Q62232 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Six2Q62232 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Six2Q62232 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.26■□□□□ 0.67
Six2Q62232 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Six2Q62232 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Six2Q62232 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Six2Q62232 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
Six2Q62232 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.26■□□□□ 0.67
Six2Q62232 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Six2Q62232 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Six2Q62232 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Six2Q62232 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.26■□□□□ 0.67
Six2Q62232 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.25■□□□□ 0.67
Six2Q62232 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Six2Q62232 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Six2Q62232 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Gm2399-201ENSMUST00000104944 225 ntBASIC19.25■□□□□ 0.67
Six2Q62232 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.25■□□□□ 0.67
Six2Q62232 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Six2Q62232 Rab3c-203ENSMUST00000224180 967 ntBASIC19.25■□□□□ 0.67
Six2Q62232 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six2Q62232 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Gm38285-201ENSMUST00000192928 922 ntBASIC19.24■□□□□ 0.67
Six2Q62232 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.24■□□□□ 0.67
Six2Q62232 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.24■□□□□ 0.67
Six2Q62232 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Six2Q62232 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Six2Q62232 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Idnk-204ENSMUST00000226010 1898 ntBASIC19.24■□□□□ 0.67
Six2Q62232 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six2Q62232 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Gm12933-201ENSMUST00000120203 872 ntBASIC19.23■□□□□ 0.67
Six2Q62232 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.23■□□□□ 0.67
Six2Q62232 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Six2Q62232 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six2Q62232 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Six2Q62232 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six2Q62232 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.22■□□□□ 0.67
Six2Q62232 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six2Q62232 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Six2Q62232 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six2Q62232 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six2Q62232 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six2Q62232 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.22■□□□□ 0.67
Six2Q62232 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.22■□□□□ 0.67
Six2Q62232 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six2Q62232 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six2Q62232 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Six2Q62232 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.21■□□□□ 0.67
Six2Q62232 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six2Q62232 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six2Q62232 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Six2Q62232 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six2Q62232 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Six2Q62232 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms