Protein–RNA interactions for Protein: Q61488

Dhh, Desert hedgehog protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhhQ61488 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.87■□□□□ 0.13
DhhQ61488 Gm5408-201ENSMUST00000197998 747 ntBASIC15.87■□□□□ 0.13
DhhQ61488 Rab3c-203ENSMUST00000224180 967 ntBASIC15.87■□□□□ 0.13
DhhQ61488 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.87■□□□□ 0.13
DhhQ61488 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
DhhQ61488 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
DhhQ61488 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DhhQ61488 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
DhhQ61488 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
DhhQ61488 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DhhQ61488 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DhhQ61488 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.87■□□□□ 0.13
DhhQ61488 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DhhQ61488 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DhhQ61488 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DhhQ61488 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
DhhQ61488 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.86■□□□□ 0.13
DhhQ61488 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
DhhQ61488 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
DhhQ61488 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DhhQ61488 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
DhhQ61488 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
DhhQ61488 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
DhhQ61488 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.86■□□□□ 0.13
DhhQ61488 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.86■□□□□ 0.13
DhhQ61488 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DhhQ61488 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
DhhQ61488 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DhhQ61488 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DhhQ61488 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DhhQ61488 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
DhhQ61488 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DhhQ61488 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DhhQ61488 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DhhQ61488 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DhhQ61488 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DhhQ61488 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DhhQ61488 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DhhQ61488 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
DhhQ61488 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
DhhQ61488 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.84■□□□□ 0.13
DhhQ61488 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
DhhQ61488 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.84■□□□□ 0.13
DhhQ61488 Gm8520-201ENSMUST00000186517 868 ntBASIC15.84■□□□□ 0.13
DhhQ61488 Gm44549-201ENSMUST00000208351 577 ntBASIC15.84■□□□□ 0.13
DhhQ61488 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.84■□□□□ 0.13
DhhQ61488 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
DhhQ61488 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
DhhQ61488 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DhhQ61488 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
DhhQ61488 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
DhhQ61488 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
DhhQ61488 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
DhhQ61488 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.83■□□□□ 0.12
DhhQ61488 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.83■□□□□ 0.12
DhhQ61488 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
DhhQ61488 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.83■□□□□ 0.12
DhhQ61488 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DhhQ61488 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.82■□□□□ 0.12
DhhQ61488 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
DhhQ61488 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
DhhQ61488 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
DhhQ61488 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.82■□□□□ 0.12
DhhQ61488 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DhhQ61488 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms