Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Zic4Q61467 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.65□□□□□ -0.06
Zic4Q61467 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.65□□□□□ -0.06
Zic4Q61467 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zic4Q61467 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.65□□□□□ -0.07
Zic4Q61467 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.64□□□□□ -0.07
Zic4Q61467 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Smad6-203ENSMUST00000179458 273 ntBASIC14.64□□□□□ -0.07
Zic4Q61467 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.64□□□□□ -0.07
Zic4Q61467 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.64□□□□□ -0.07
Zic4Q61467 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.64□□□□□ -0.07
Zic4Q61467 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.64□□□□□ -0.07
Zic4Q61467 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Zic4Q61467 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Zic4Q61467 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zic4Q61467 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 Idnk-204ENSMUST00000226010 1898 ntBASIC14.63□□□□□ -0.07
Zic4Q61467 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.63□□□□□ -0.07
Zic4Q61467 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Zic4Q61467 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Zic4Q61467 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Zic4Q61467 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.63□□□□□ -0.07
Zic4Q61467 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Zic4Q61467 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Zic4Q61467 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zic4Q61467 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Zic4Q61467 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Zic4Q61467 Gm11421-201ENSMUST00000122124 294 ntBASIC14.62□□□□□ -0.07
Zic4Q61467 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.62□□□□□ -0.07
Zic4Q61467 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.62□□□□□ -0.07
Zic4Q61467 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.62□□□□□ -0.07
Zic4Q61467 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Zic4Q61467 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Zic4Q61467 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Zic4Q61467 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Zic4Q61467 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Zic4Q61467 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Zic4Q61467 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Zic4Q61467 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Zic4Q61467 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.61□□□□□ -0.07
Zic4Q61467 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Zic4Q61467 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Zic4Q61467 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Zic4Q61467 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Zic4Q61467 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Zic4Q61467 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Zic4Q61467 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Zic4Q61467 Gm38205-201ENSMUST00000192243 258 ntBASIC14.6□□□□□ -0.07
Zic4Q61467 Gm43137-201ENSMUST00000198052 594 ntBASIC14.6□□□□□ -0.07
Zic4Q61467 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms