Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.02■□□□□ 0.8
Ift88Q61371 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ift88Q61371 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ift88Q61371 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ift88Q61371 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ift88Q61371 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ift88Q61371 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ift88Q61371 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.79
Ift88Q61371 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ift88Q61371 Gm13234-201ENSMUST00000120010 747 ntBASIC20.01■□□□□ 0.79
Ift88Q61371 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ift88Q61371 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ift88Q61371 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.01■□□□□ 0.79
Ift88Q61371 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.01■□□□□ 0.79
Ift88Q61371 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20■□□□□ 0.79
Ift88Q61371 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ift88Q61371 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ift88Q61371 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ift88Q61371 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ift88Q61371 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ift88Q61371 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.99■□□□□ 0.79
Ift88Q61371 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.99■□□□□ 0.79
Ift88Q61371 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Ift88Q61371 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ift88Q61371 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ift88Q61371 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ift88Q61371 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ift88Q61371 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ift88Q61371 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ift88Q61371 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ift88Q61371 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Ift88Q61371 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.98■□□□□ 0.79
Ift88Q61371 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ift88Q61371 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ift88Q61371 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ift88Q61371 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ift88Q61371 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.98■□□□□ 0.79
Ift88Q61371 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.97■□□□□ 0.79
Ift88Q61371 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.97■□□□□ 0.79
Ift88Q61371 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ift88Q61371 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ift88Q61371 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ift88Q61371 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Ift88Q61371 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ift88Q61371 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.97■□□□□ 0.79
Ift88Q61371 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ift88Q61371 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ift88Q61371 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ift88Q61371 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ift88Q61371 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ift88Q61371 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.97■□□□□ 0.79
Ift88Q61371 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ift88Q61371 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.96■□□□□ 0.79
Ift88Q61371 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ift88Q61371 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.96■□□□□ 0.79
Ift88Q61371 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ift88Q61371 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ift88Q61371 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ift88Q61371 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.96■□□□□ 0.79
Ift88Q61371 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ift88Q61371 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.96■□□□□ 0.79
Ift88Q61371 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ift88Q61371 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ift88Q61371 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ift88Q61371 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
Ift88Q61371 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ift88Q61371 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ift88Q61371 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ift88Q61371 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ift88Q61371 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Ift88Q61371 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
Ift88Q61371 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ift88Q61371 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ift88Q61371 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ift88Q61371 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.95■□□□□ 0.78
Ift88Q61371 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ift88Q61371 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ift88Q61371 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ift88Q61371 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.94■□□□□ 0.78
Ift88Q61371 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Ift88Q61371 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.94■□□□□ 0.78
Ift88Q61371 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ift88Q61371 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms