Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ctc1Q5SUQ9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ctc1Q5SUQ9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ctc1Q5SUQ9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ctc1Q5SUQ9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ctc1Q5SUQ9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ctc1Q5SUQ9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctc1Q5SUQ9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 Tgds-204ENSMUST00000228543 1594 ntBASIC19.13■□□□□ 0.65
Ctc1Q5SUQ9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ctc1Q5SUQ9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Mir6982-201ENSMUST00000184354 68 ntBASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctc1Q5SUQ9 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ctc1Q5SUQ9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctc1Q5SUQ9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms