Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gm45102-201ENSMUST00000207427 857 ntBASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Tgds-204ENSMUST00000228543 1594 ntBASIC14.05□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gm43137-201ENSMUST00000198052 594 ntBASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Smad6-203ENSMUST00000179458 273 ntBASIC14.02□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms