Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps41Q5KU39 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.85■□□□□ 0.61
Vps41Q5KU39 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps41Q5KU39 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.84■□□□□ 0.61
Vps41Q5KU39 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps41Q5KU39 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps41Q5KU39 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps41Q5KU39 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.83■□□□□ 0.6
Vps41Q5KU39 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.83■□□□□ 0.6
Vps41Q5KU39 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Vps41Q5KU39 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps41Q5KU39 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Vps41Q5KU39 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps41Q5KU39 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps41Q5KU39 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps41Q5KU39 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps41Q5KU39 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps41Q5KU39 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Gm43060-201ENSMUST00000200621 289 ntBASIC18.82■□□□□ 0.6
Vps41Q5KU39 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.82■□□□□ 0.6
Vps41Q5KU39 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps41Q5KU39 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps41Q5KU39 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps41Q5KU39 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vps41Q5KU39 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps41Q5KU39 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.81■□□□□ 0.6
Vps41Q5KU39 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps41Q5KU39 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps41Q5KU39 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps41Q5KU39 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.81■□□□□ 0.6
Vps41Q5KU39 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps41Q5KU39 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps41Q5KU39 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps41Q5KU39 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps41Q5KU39 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps41Q5KU39 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps41Q5KU39 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps41Q5KU39 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps41Q5KU39 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps41Q5KU39 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms