Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx49Q4FZF3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx49Q4FZF3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.98■□□□□ 0.95
Ddx49Q4FZF3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx49Q4FZF3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx49Q4FZF3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx49Q4FZF3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Gm10013-201ENSMUST00000106074 672 ntBASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Mir6349-201ENSMUST00000184059 97 ntBASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.97■□□□□ 0.95
Ddx49Q4FZF3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Gm6345-202ENSMUST00000180900 204 ntBASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx49Q4FZF3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx49Q4FZF3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Gm18032-201ENSMUST00000222541 538 ntBASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ddx49Q4FZF3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 AA414768-201ENSMUST00000121924 1257 ntBASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx49Q4FZF3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Gm33142-201ENSMUST00000193913 867 ntBASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx49Q4FZF3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx49Q4FZF3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx49Q4FZF3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.91■□□□□ 0.94
Ddx49Q4FZF3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.91■□□□□ 0.94
Ddx49Q4FZF3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx49Q4FZF3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx49Q4FZF3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx49Q4FZF3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Gm45058-201ENSMUST00000205810 766 ntBASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms