Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Gm22325-201ENSMUST00000158904 308 ntBASIC19.29■□□□□ 0.68
BC051142Q3V0M8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.29■□□□□ 0.68
BC051142Q3V0M8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BC051142Q3V0M8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
BC051142Q3V0M8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
BC051142Q3V0M8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.27■□□□□ 0.68
BC051142Q3V0M8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BC051142Q3V0M8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BC051142Q3V0M8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.27■□□□□ 0.68
BC051142Q3V0M8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BC051142Q3V0M8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.27■□□□□ 0.68
BC051142Q3V0M8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BC051142Q3V0M8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BC051142Q3V0M8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BC051142Q3V0M8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BC051142Q3V0M8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BC051142Q3V0M8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Gm6211-202ENSMUST00000167849 925 ntBASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BC051142Q3V0M8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Gm13148-201ENSMUST00000118892 745 ntBASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BC051142Q3V0M8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BC051142Q3V0M8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
BC051142Q3V0M8 Gm37179-201ENSMUST00000194862 823 ntBASIC19.22■□□□□ 0.67
BC051142Q3V0M8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
BC051142Q3V0M8 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.22■□□□□ 0.67
BC051142Q3V0M8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms