Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trim80Q3V061 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.62■□□□□ 0.57
Trim80Q3V061 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.62■□□□□ 0.57
Trim80Q3V061 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Trim80Q3V061 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim80Q3V061 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Trim80Q3V061 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Trim80Q3V061 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim80Q3V061 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.61■□□□□ 0.57
Trim80Q3V061 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim80Q3V061 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim80Q3V061 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim80Q3V061 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim80Q3V061 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim80Q3V061 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim80Q3V061 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.6■□□□□ 0.57
Trim80Q3V061 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim80Q3V061 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim80Q3V061 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.59■□□□□ 0.57
Trim80Q3V061 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim80Q3V061 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.59■□□□□ 0.57
Trim80Q3V061 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim80Q3V061 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim80Q3V061 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim80Q3V061 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim80Q3V061 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim80Q3V061 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.58■□□□□ 0.57
Trim80Q3V061 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim80Q3V061 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim80Q3V061 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim80Q3V061 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Trim80Q3V061 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim80Q3V061 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim80Q3V061 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim80Q3V061 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trim80Q3V061 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim80Q3V061 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim80Q3V061 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim80Q3V061 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim80Q3V061 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim80Q3V061 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim80Q3V061 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim80Q3V061 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.58■□□□□ 0.56
Trim80Q3V061 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim80Q3V061 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim80Q3V061 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.57■□□□□ 0.56
Trim80Q3V061 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim80Q3V061 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim80Q3V061 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim80Q3V061 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trim80Q3V061 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms