Protein–RNA interactions for Protein: Q3TKT4

Smarca4, Transcription activator BRG1, mousemouse

Known RBP Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca4Q3TKT4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca4Q3TKT4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca4Q3TKT4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca4Q3TKT4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca4Q3TKT4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Smarca4Q3TKT4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC31.46■■■□□ 2.63
Smarca4Q3TKT4 Gm24589-201ENSMUST00000116692 94 ntBASIC31.46■■■□□ 2.63
Smarca4Q3TKT4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC31.46■■■□□ 2.63
Smarca4Q3TKT4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca4Q3TKT4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca4Q3TKT4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca4Q3TKT4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca4Q3TKT4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca4Q3TKT4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca4Q3TKT4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC31.45■■■□□ 2.63
Smarca4Q3TKT4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca4Q3TKT4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Smarca4Q3TKT4 Gm18115-201ENSMUST00000221209 621 ntBASIC31.45■■■□□ 2.62
Smarca4Q3TKT4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Smarca4Q3TKT4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC31.45■■■□□ 2.62
Smarca4Q3TKT4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smarca4Q3TKT4 Gm34391-201ENSMUST00000203706 907 ntBASIC31.44■■■□□ 2.62
Smarca4Q3TKT4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smarca4Q3TKT4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smarca4Q3TKT4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Mir3081-201ENSMUST00000175305 84 ntBASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Gm9731-201ENSMUST00000209480 747 ntBASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Gm7213-201ENSMUST00000215977 950 ntBASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Mzt1-203ENSMUST00000227948 952 ntBASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Smarca4Q3TKT4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Smarca4Q3TKT4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Smarca4Q3TKT4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
Smarca4Q3TKT4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Smarca4Q3TKT4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC31.42■■■□□ 2.62
Smarca4Q3TKT4 Otx2os1-206ENSMUST00000228153 787 ntBASIC31.42■■■□□ 2.62
Smarca4Q3TKT4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Smarca4Q3TKT4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Smarca4Q3TKT4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Smarca4Q3TKT4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca4Q3TKT4 Gm25925-201ENSMUST00000158314 306 ntBASIC31.4■■■□□ 2.62
Smarca4Q3TKT4 AC164629.2-201ENSMUST00000217916 270 ntBASIC31.4■■■□□ 2.62
Smarca4Q3TKT4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smarca4Q3TKT4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Smarca4Q3TKT4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Smarca4Q3TKT4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC31.4■■■□□ 2.62
Smarca4Q3TKT4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smarca4Q3TKT4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smarca4Q3TKT4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smarca4Q3TKT4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Smarca4Q3TKT4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC31.39■■■□□ 2.62
Smarca4Q3TKT4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca4Q3TKT4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca4Q3TKT4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca4Q3TKT4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca4Q3TKT4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca4Q3TKT4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC31.38■■■□□ 2.61
Smarca4Q3TKT4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca4Q3TKT4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC31.38■■■□□ 2.61
Smarca4Q3TKT4 Il3ra-202ENSMUST00000223589 738 ntBASIC31.38■■■□□ 2.61
Smarca4Q3TKT4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca4Q3TKT4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC31.38■■■□□ 2.61
Smarca4Q3TKT4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
Smarca4Q3TKT4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca4Q3TKT4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC31.38■■■□□ 2.61
Smarca4Q3TKT4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Smarca4Q3TKT4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Smarca4Q3TKT4 Gm11860-201ENSMUST00000122346 1010 ntBASIC31.37■■■□□ 2.61
Smarca4Q3TKT4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Smarca4Q3TKT4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC31.37■■■□□ 2.61
Smarca4Q3TKT4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
Smarca4Q3TKT4 Gm15853-202ENSMUST00000195518 2041 ntBASIC31.37■■■□□ 2.61
Smarca4Q3TKT4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Smarca4Q3TKT4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Smarca4Q3TKT4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smarca4Q3TKT4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Smarca4Q3TKT4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smarca4Q3TKT4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms