Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.6■□□□□ 0.73
CiitaP79621 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CiitaP79621 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CiitaP79621 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CiitaP79621 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.6■□□□□ 0.73
CiitaP79621 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CiitaP79621 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.59■□□□□ 0.73
CiitaP79621 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.59■□□□□ 0.73
CiitaP79621 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.59■□□□□ 0.73
CiitaP79621 Gm37292-201ENSMUST00000192062 758 ntBASIC19.59■□□□□ 0.73
CiitaP79621 Gm42545-201ENSMUST00000202755 922 ntBASIC19.59■□□□□ 0.73
CiitaP79621 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.59■□□□□ 0.73
CiitaP79621 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.59■□□□□ 0.73
CiitaP79621 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CiitaP79621 Tgds-204ENSMUST00000228543 1594 ntBASIC19.58■□□□□ 0.73
CiitaP79621 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CiitaP79621 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CiitaP79621 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CiitaP79621 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.58■□□□□ 0.72
CiitaP79621 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CiitaP79621 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.58■□□□□ 0.72
CiitaP79621 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CiitaP79621 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CiitaP79621 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CiitaP79621 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CiitaP79621 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CiitaP79621 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CiitaP79621 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CiitaP79621 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.57■□□□□ 0.72
CiitaP79621 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.57■□□□□ 0.72
CiitaP79621 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CiitaP79621 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CiitaP79621 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CiitaP79621 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CiitaP79621 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.57■□□□□ 0.72
CiitaP79621 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.57■□□□□ 0.72
CiitaP79621 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CiitaP79621 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CiitaP79621 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CiitaP79621 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CiitaP79621 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CiitaP79621 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CiitaP79621 Gm715-201ENSMUST00000117865 831 ntBASIC19.56■□□□□ 0.72
CiitaP79621 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.56■□□□□ 0.72
CiitaP79621 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.56■□□□□ 0.72
CiitaP79621 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CiitaP79621 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.56■□□□□ 0.72
CiitaP79621 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.56■□□□□ 0.72
CiitaP79621 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CiitaP79621 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.56■□□□□ 0.72
CiitaP79621 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.56■□□□□ 0.72
CiitaP79621 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CiitaP79621 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CiitaP79621 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CiitaP79621 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.55■□□□□ 0.72
CiitaP79621 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.55■□□□□ 0.72
CiitaP79621 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CiitaP79621 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.55■□□□□ 0.72
CiitaP79621 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.55■□□□□ 0.72
CiitaP79621 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CiitaP79621 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.55■□□□□ 0.72
CiitaP79621 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.55■□□□□ 0.72
CiitaP79621 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CiitaP79621 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CiitaP79621 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.54■□□□□ 0.72
CiitaP79621 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CiitaP79621 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CiitaP79621 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.54■□□□□ 0.72
CiitaP79621 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CiitaP79621 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CiitaP79621 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CiitaP79621 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CiitaP79621 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms