Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pdlim4P70271 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim4P70271 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim4P70271 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim4P70271 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Pdlim4P70271 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Pdlim4P70271 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim4P70271 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim4P70271 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim4P70271 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim4P70271 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim4P70271 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.01□□□□□ -0.01
Pdlim4P70271 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim4P70271 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim4P70271 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.01□□□□□ -0.01
Pdlim4P70271 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pdlim4P70271 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim4P70271 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim4P70271 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pdlim4P70271 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15□□□□□ -0.01
Pdlim4P70271 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pdlim4P70271 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pdlim4P70271 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim4P70271 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pdlim4P70271 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Pdlim4P70271 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.99□□□□□ -0.01
Pdlim4P70271 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pdlim4P70271 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
Pdlim4P70271 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.99□□□□□ -0.01
Pdlim4P70271 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.99□□□□□ -0.01
Pdlim4P70271 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.99□□□□□ -0.01
Pdlim4P70271 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pdlim4P70271 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim4P70271 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.98□□□□□ -0.01
Pdlim4P70271 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.98□□□□□ -0.01
Pdlim4P70271 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.98□□□□□ -0.01
Pdlim4P70271 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pdlim4P70271 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.98□□□□□ -0.01
Pdlim4P70271 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim4P70271 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim4P70271 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim4P70271 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pdlim4P70271 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim4P70271 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim4P70271 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.97□□□□□ -0.01
Pdlim4P70271 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.97□□□□□ -0.01
Pdlim4P70271 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim4P70271 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.97□□□□□ -0.01
Pdlim4P70271 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim4P70271 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim4P70271 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim4P70271 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim4P70271 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pdlim4P70271 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms