Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp25P57080 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp25P57080 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.46■□□□□ 0.87
Usp25P57080 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Usp25P57080 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp25P57080 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp25P57080 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp25P57080 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Usp25P57080 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Usp25P57080 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp25P57080 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.45■□□□□ 0.86
Usp25P57080 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp25P57080 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp25P57080 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp25P57080 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp25P57080 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp25P57080 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp25P57080 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp25P57080 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp25P57080 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Usp25P57080 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Usp25P57080 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.44■□□□□ 0.86
Usp25P57080 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp25P57080 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp25P57080 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Usp25P57080 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Usp25P57080 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.43■□□□□ 0.86
Usp25P57080 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Usp25P57080 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.43■□□□□ 0.86
Usp25P57080 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Usp25P57080 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp25P57080 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.43■□□□□ 0.86
Usp25P57080 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp25P57080 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Gm43017-201ENSMUST00000198296 752 ntBASIC20.42■□□□□ 0.86
Usp25P57080 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.42■□□□□ 0.86
Usp25P57080 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp25P57080 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.42■□□□□ 0.86
Usp25P57080 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp25P57080 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Usp25P57080 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Usp25P57080 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Usp25P57080 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp25P57080 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.41■□□□□ 0.86
Usp25P57080 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp25P57080 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Usp25P57080 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
Usp25P57080 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.4■□□□□ 0.86
Usp25P57080 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp25P57080 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp25P57080 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp25P57080 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp25P57080 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp25P57080 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp25P57080 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp25P57080 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp25P57080 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp25P57080 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Usp25P57080 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp25P57080 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms