Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SmoP56726 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SmoP56726 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SmoP56726 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SmoP56726 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SmoP56726 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.16■□□□□ 0.5
SmoP56726 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.16■□□□□ 0.5
SmoP56726 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SmoP56726 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SmoP56726 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SmoP56726 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SmoP56726 Mir6349-201ENSMUST00000184059 97 ntBASIC18.15■□□□□ 0.5
SmoP56726 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.15■□□□□ 0.5
SmoP56726 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.15■□□□□ 0.5
SmoP56726 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.15■□□□□ 0.5
SmoP56726 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SmoP56726 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SmoP56726 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SmoP56726 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.15■□□□□ 0.5
SmoP56726 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SmoP56726 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SmoP56726 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SmoP56726 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SmoP56726 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SmoP56726 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SmoP56726 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SmoP56726 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
SmoP56726 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SmoP56726 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.14■□□□□ 0.49
SmoP56726 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.14■□□□□ 0.49
SmoP56726 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SmoP56726 Gm18025-201ENSMUST00000221733 862 ntBASIC18.14■□□□□ 0.49
SmoP56726 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SmoP56726 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SmoP56726 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SmoP56726 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SmoP56726 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SmoP56726 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.13■□□□□ 0.49
SmoP56726 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SmoP56726 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SmoP56726 Mir2861-201ENSMUST00000175539 82 ntBASIC18.13■□□□□ 0.49
SmoP56726 Gm10252-201ENSMUST00000209541 832 ntBASIC18.13■□□□□ 0.49
SmoP56726 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.13■□□□□ 0.49
SmoP56726 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SmoP56726 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SmoP56726 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SmoP56726 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.13■□□□□ 0.49
SmoP56726 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SmoP56726 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SmoP56726 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SmoP56726 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SmoP56726 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SmoP56726 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SmoP56726 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SmoP56726 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SmoP56726 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.12■□□□□ 0.49
SmoP56726 Gm42545-201ENSMUST00000202755 922 ntBASIC18.12■□□□□ 0.49
SmoP56726 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SmoP56726 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.12■□□□□ 0.49
SmoP56726 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SmoP56726 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SmoP56726 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SmoP56726 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SmoP56726 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SmoP56726 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SmoP56726 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SmoP56726 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SmoP56726 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.11■□□□□ 0.49
SmoP56726 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SmoP56726 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SmoP56726 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SmoP56726 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SmoP56726 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.11■□□□□ 0.49
SmoP56726 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.11■□□□□ 0.49
SmoP56726 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SmoP56726 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SmoP56726 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SmoP56726 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SmoP56726 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SmoP56726 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Gm43183-201ENSMUST00000200632 547 ntBASIC18.1■□□□□ 0.49
SmoP56726 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SmoP56726 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms