Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Msh6P54276 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Msh6P54276 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Msh6P54276 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Msh6P54276 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Msh6P54276 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Msh6P54276 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Msh6P54276 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Msh6P54276 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
Msh6P54276 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Msh6P54276 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Msh6P54276 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Msh6P54276 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Msh6P54276 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Msh6P54276 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Msh6P54276 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Msh6P54276 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Msh6P54276 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Msh6P54276 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Msh6P54276 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC23.04■■□□□ 1.28
Msh6P54276 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Msh6P54276 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Msh6P54276 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
Msh6P54276 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Msh6P54276 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Msh6P54276 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Msh6P54276 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Msh6P54276 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Msh6P54276 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Msh6P54276 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Msh6P54276 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Msh6P54276 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
Msh6P54276 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Msh6P54276 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Msh6P54276 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.27
Msh6P54276 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC23.01■■□□□ 1.27
Msh6P54276 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Msh6P54276 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Mir6349-201ENSMUST00000184059 97 ntBASIC23.01■■□□□ 1.27
Msh6P54276 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Msh6P54276 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Msh6P54276 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC23■■□□□ 1.27
Msh6P54276 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Gm12382-201ENSMUST00000122005 922 ntBASIC23■■□□□ 1.27
Msh6P54276 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC23■■□□□ 1.27
Msh6P54276 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Mir2861-201ENSMUST00000175539 82 ntBASIC23■■□□□ 1.27
Msh6P54276 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC23■■□□□ 1.27
Msh6P54276 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Msh6P54276 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Iqck-206ENSMUST00000208658 2891 ntBASIC22.99■■□□□ 1.27
Msh6P54276 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.99■■□□□ 1.27
Msh6P54276 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Msh6P54276 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Msh6P54276 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Msh6P54276 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Msh6P54276 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Msh6P54276 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Msh6P54276 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Msh6P54276 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Msh6P54276 Gm7367-201ENSMUST00000057611 492 ntBASIC22.98■■□□□ 1.27
Msh6P54276 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Msh6P54276 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Msh6P54276 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Msh6P54276 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Msh6P54276 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Msh6P54276 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.97■■□□□ 1.27
Msh6P54276 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms