Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Atoh1P48985 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atoh1P48985 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.52■□□□□ 0.88
Atoh1P48985 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atoh1P48985 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atoh1P48985 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atoh1P48985 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atoh1P48985 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atoh1P48985 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Atoh1P48985 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.52■□□□□ 0.87
Atoh1P48985 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.52■□□□□ 0.87
Atoh1P48985 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Atoh1P48985 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Gm17971-201ENSMUST00000190239 806 ntBASIC20.51■□□□□ 0.87
Atoh1P48985 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atoh1P48985 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atoh1P48985 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.5■□□□□ 0.87
Atoh1P48985 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atoh1P48985 Gm16061-201ENSMUST00000122167 857 ntBASIC20.5■□□□□ 0.87
Atoh1P48985 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.5■□□□□ 0.87
Atoh1P48985 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.5■□□□□ 0.87
Atoh1P48985 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Atoh1P48985 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atoh1P48985 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Atoh1P48985 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
Atoh1P48985 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.49■□□□□ 0.87
Atoh1P48985 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.49■□□□□ 0.87
Atoh1P48985 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atoh1P48985 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Atoh1P48985 Gm4974-201ENSMUST00000209974 875 ntBASIC20.48■□□□□ 0.87
Atoh1P48985 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atoh1P48985 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atoh1P48985 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atoh1P48985 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atoh1P48985 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atoh1P48985 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atoh1P48985 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atoh1P48985 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Atoh1P48985 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atoh1P48985 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atoh1P48985 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Atoh1P48985 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atoh1P48985 Gm27704-201ENSMUST00000185094 107 ntBASIC20.47■□□□□ 0.87
Atoh1P48985 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atoh1P48985 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atoh1P48985 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atoh1P48985 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atoh1P48985 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atoh1P48985 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Atoh1P48985 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atoh1P48985 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Atoh1P48985 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.46■□□□□ 0.87
Atoh1P48985 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.46■□□□□ 0.87
Atoh1P48985 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atoh1P48985 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atoh1P48985 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Atoh1P48985 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Atoh1P48985 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atoh1P48985 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Atoh1P48985 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atoh1P48985 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atoh1P48985 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atoh1P48985 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atoh1P48985 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atoh1P48985 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.45■□□□□ 0.86
Atoh1P48985 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atoh1P48985 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.45■□□□□ 0.86
Atoh1P48985 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atoh1P48985 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atoh1P48985 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atoh1P48985 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Atoh1P48985 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atoh1P48985 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atoh1P48985 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Atoh1P48985 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atoh1P48985 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Atoh1P48985 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atoh1P48985 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atoh1P48985 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atoh1P48985 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms