Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HttP42859 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.48■□□□□ 0.71
HttP42859 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HttP42859 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.47■□□□□ 0.71
HttP42859 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.47■□□□□ 0.71
HttP42859 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.47■□□□□ 0.71
HttP42859 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.47■□□□□ 0.71
HttP42859 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.47■□□□□ 0.71
HttP42859 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.47■□□□□ 0.71
HttP42859 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.47■□□□□ 0.71
HttP42859 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HttP42859 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HttP42859 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
HttP42859 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HttP42859 Gm13884-201ENSMUST00000118103 829 ntBASIC19.46■□□□□ 0.71
HttP42859 Gm13474-201ENSMUST00000122466 815 ntBASIC19.46■□□□□ 0.71
HttP42859 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HttP42859 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HttP42859 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HttP42859 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
HttP42859 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.46■□□□□ 0.71
HttP42859 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.46■□□□□ 0.71
HttP42859 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HttP42859 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HttP42859 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HttP42859 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HttP42859 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HttP42859 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.45■□□□□ 0.7
HttP42859 Gm27389-201ENSMUST00000183622 195 ntBASIC19.45■□□□□ 0.7
HttP42859 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.45■□□□□ 0.7
HttP42859 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HttP42859 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HttP42859 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HttP42859 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HttP42859 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.45■□□□□ 0.7
HttP42859 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HttP42859 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HttP42859 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HttP42859 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HttP42859 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HttP42859 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HttP42859 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HttP42859 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HttP42859 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.43■□□□□ 0.7
HttP42859 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HttP42859 Gm28659-201ENSMUST00000188013 759 ntBASIC19.43■□□□□ 0.7
HttP42859 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HttP42859 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HttP42859 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HttP42859 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HttP42859 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HttP42859 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.43■□□□□ 0.7
HttP42859 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HttP42859 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HttP42859 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
HttP42859 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HttP42859 Gm18733-201ENSMUST00000173950 856 ntBASIC19.42■□□□□ 0.7
HttP42859 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HttP42859 Gm43347-201ENSMUST00000200226 580 ntBASIC19.42■□□□□ 0.7
HttP42859 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HttP42859 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.42■□□□□ 0.7
HttP42859 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HttP42859 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HttP42859 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HttP42859 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HttP42859 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HttP42859 Mir1668-201ENSMUST00000184114 107 ntBASIC19.42■□□□□ 0.7
HttP42859 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HttP42859 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HttP42859 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
HttP42859 Gm5864-201ENSMUST00000202263 970 ntBASIC19.41■□□□□ 0.7
HttP42859 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HttP42859 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HttP42859 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HttP42859 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HttP42859 Gm7063-201ENSMUST00000186840 981 ntBASIC19.41■□□□□ 0.7
HttP42859 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HttP42859 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HttP42859 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HttP42859 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HttP42859 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HttP42859 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HttP42859 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HttP42859 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HttP42859 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HttP42859 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HttP42859 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HttP42859 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
HttP42859 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
HttP42859 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms