Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LdlrP35951 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LdlrP35951 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.95■□□□□ 0.46
LdlrP35951 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.95■□□□□ 0.46
LdlrP35951 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.95■□□□□ 0.46
LdlrP35951 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.95■□□□□ 0.46
LdlrP35951 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
LdlrP35951 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LdlrP35951 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.94■□□□□ 0.46
LdlrP35951 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LdlrP35951 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LdlrP35951 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.94■□□□□ 0.46
LdlrP35951 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LdlrP35951 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LdlrP35951 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LdlrP35951 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.94■□□□□ 0.46
LdlrP35951 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LdlrP35951 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LdlrP35951 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LdlrP35951 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LdlrP35951 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LdlrP35951 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LdlrP35951 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LdlrP35951 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 Reep4-203ENSMUST00000226563 1444 ntBASIC17.93■□□□□ 0.46
LdlrP35951 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.93■□□□□ 0.46
LdlrP35951 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.93■□□□□ 0.46
LdlrP35951 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.93■□□□□ 0.46
LdlrP35951 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.93■□□□□ 0.46
LdlrP35951 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LdlrP35951 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LdlrP35951 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LdlrP35951 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.92■□□□□ 0.46
LdlrP35951 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LdlrP35951 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LdlrP35951 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LdlrP35951 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LdlrP35951 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LdlrP35951 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LdlrP35951 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
LdlrP35951 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LdlrP35951 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LdlrP35951 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LdlrP35951 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Tgds-204ENSMUST00000228543 1594 ntBASIC17.91■□□□□ 0.46
LdlrP35951 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LdlrP35951 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LdlrP35951 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.91■□□□□ 0.46
LdlrP35951 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.91■□□□□ 0.46
LdlrP35951 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.91■□□□□ 0.46
LdlrP35951 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.91■□□□□ 0.46
LdlrP35951 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LdlrP35951 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.91■□□□□ 0.46
LdlrP35951 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LdlrP35951 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.9■□□□□ 0.46
LdlrP35951 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.9■□□□□ 0.46
LdlrP35951 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.9■□□□□ 0.46
LdlrP35951 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LdlrP35951 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LdlrP35951 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms