Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp6P0C0A3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.66■□□□□ 0.74
Chmp6P0C0A3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Chmp6P0C0A3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.65■□□□□ 0.74
Chmp6P0C0A3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp6P0C0A3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp6P0C0A3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp6P0C0A3 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.64■□□□□ 0.74
Chmp6P0C0A3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.64■□□□□ 0.73
Chmp6P0C0A3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp6P0C0A3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.62■□□□□ 0.73
Chmp6P0C0A3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp6P0C0A3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp6P0C0A3 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp6P0C0A3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp6P0C0A3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp6P0C0A3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp6P0C0A3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms