Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
P04213 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04213 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04213 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
P04213 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
P04213 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.31■□□□□ 0.36
P04213 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04213 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04213 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04213 Gm8495-201ENSMUST00000188740 694 ntBASIC17.31■□□□□ 0.36
P04213 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04213 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04213 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04213 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04213 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04213 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.31■□□□□ 0.36
P04213 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04213 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.3■□□□□ 0.36
P04213 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.3■□□□□ 0.36
P04213 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.3■□□□□ 0.36
P04213 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
P04213 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04213 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.29■□□□□ 0.36
P04213 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.29■□□□□ 0.36
P04213 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.29■□□□□ 0.36
P04213 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04213 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.28■□□□□ 0.36
P04213 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.28■□□□□ 0.36
P04213 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.28■□□□□ 0.36
P04213 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04213 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
P04213 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.28■□□□□ 0.36
P04213 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P04213 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.27■□□□□ 0.36
P04213 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04213 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.27■□□□□ 0.36
P04213 Gm6211-202ENSMUST00000167849 925 ntBASIC17.27■□□□□ 0.36
P04213 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P04213 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04213 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04213 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04213 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04213 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04213 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P04213 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04213 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04213 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04213 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
P04213 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
P04213 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
P04213 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
P04213 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.26■□□□□ 0.35
P04213 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P04213 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04213 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04213 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04213 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04213 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04213 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
P04213 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms