Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.36■□□□□ 0.21
P01808 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.36■□□□□ 0.21
P01808 Gm38285-201ENSMUST00000192928 922 ntBASIC16.36■□□□□ 0.21
P01808 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.36■□□□□ 0.21
P01808 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01808 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01808 Zfp783-201ENSMUST00000095946 670 ntBASIC16.36■□□□□ 0.21
P01808 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01808 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01808 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01808 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01808 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01808 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01808 Gm12527-201ENSMUST00000117967 564 ntBASIC16.35■□□□□ 0.21
P01808 Gm11927-201ENSMUST00000118472 759 ntBASIC16.35■□□□□ 0.21
P01808 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01808 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
P01808 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01808 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
P01808 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01808 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01808 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01808 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01808 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
P01808 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Grk6-206ENSMUST00000224995 2971 ntBASIC16.34■□□□□ 0.21
P01808 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.34■□□□□ 0.21
P01808 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.34■□□□□ 0.21
P01808 Gm27275-201ENSMUST00000184318 272 ntBASIC16.34■□□□□ 0.21
P01808 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.34■□□□□ 0.21
P01808 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.34■□□□□ 0.21
P01808 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
P01808 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P01808 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
P01808 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01808 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.33■□□□□ 0.2
P01808 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.33■□□□□ 0.2
P01808 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.33■□□□□ 0.2
P01808 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.33■□□□□ 0.2
P01808 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.33■□□□□ 0.2
P01808 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.33■□□□□ 0.2
P01808 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P01808 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P01808 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
P01808 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
P01808 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.32■□□□□ 0.2
P01808 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
P01808 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01808 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
P01808 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.31■□□□□ 0.2
P01808 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Gm11249-201ENSMUST00000117071 859 ntBASIC16.31■□□□□ 0.2
P01808 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.31■□□□□ 0.2
P01808 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Mtag2-201ENSMUST00000058665 714 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms