Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ShdO88834 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.45■□□□□ 0.54
ShdO88834 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.45■□□□□ 0.54
ShdO88834 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ShdO88834 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ShdO88834 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShdO88834 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.44■□□□□ 0.54
ShdO88834 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
ShdO88834 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ShdO88834 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShdO88834 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ShdO88834 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ShdO88834 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
ShdO88834 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShdO88834 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShdO88834 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ShdO88834 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.44■□□□□ 0.54
ShdO88834 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ShdO88834 Gm5408-201ENSMUST00000197998 747 ntBASIC18.44■□□□□ 0.54
ShdO88834 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ShdO88834 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.44■□□□□ 0.54
ShdO88834 Rab3c-203ENSMUST00000224180 967 ntBASIC18.44■□□□□ 0.54
ShdO88834 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ShdO88834 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShdO88834 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ShdO88834 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ShdO88834 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.43■□□□□ 0.54
ShdO88834 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ShdO88834 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ShdO88834 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ShdO88834 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShdO88834 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
ShdO88834 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ShdO88834 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.42■□□□□ 0.54
ShdO88834 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShdO88834 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShdO88834 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ShdO88834 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.42■□□□□ 0.54
ShdO88834 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShdO88834 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShdO88834 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ShdO88834 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.42■□□□□ 0.54
ShdO88834 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.42■□□□□ 0.54
ShdO88834 Gm44549-201ENSMUST00000208351 577 ntBASIC18.42■□□□□ 0.54
ShdO88834 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.42■□□□□ 0.54
ShdO88834 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShdO88834 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShdO88834 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShdO88834 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShdO88834 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.42■□□□□ 0.54
ShdO88834 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShdO88834 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ShdO88834 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
ShdO88834 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.41■□□□□ 0.54
ShdO88834 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.41■□□□□ 0.54
ShdO88834 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ShdO88834 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.41■□□□□ 0.54
ShdO88834 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShdO88834 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.41■□□□□ 0.54
ShdO88834 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Gm2399-201ENSMUST00000104944 225 ntBASIC18.4■□□□□ 0.54
ShdO88834 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ShdO88834 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.4■□□□□ 0.54
ShdO88834 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.4■□□□□ 0.54
ShdO88834 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ShdO88834 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ShdO88834 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ShdO88834 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms