Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc3O88196 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc3O88196 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc3O88196 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc3O88196 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.02■□□□□ 0.64
Ttc3O88196 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc3O88196 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc3O88196 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.02■□□□□ 0.64
Ttc3O88196 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc3O88196 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.02■□□□□ 0.63
Ttc3O88196 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ttc3O88196 Tgds-204ENSMUST00000228543 1594 ntBASIC19.02■□□□□ 0.63
Ttc3O88196 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ttc3O88196 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Ttc3O88196 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ttc3O88196 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc3O88196 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc3O88196 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.01■□□□□ 0.63
Ttc3O88196 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ttc3O88196 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.01■□□□□ 0.63
Ttc3O88196 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc3O88196 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc3O88196 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc3O88196 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc3O88196 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc3O88196 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ttc3O88196 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ttc3O88196 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc3O88196 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ttc3O88196 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19■□□□□ 0.63
Ttc3O88196 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ttc3O88196 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19■□□□□ 0.63
Ttc3O88196 Gm11539-201ENSMUST00000119837 557 ntBASIC19■□□□□ 0.63
Ttc3O88196 Gm13436-201ENSMUST00000120418 567 ntBASIC19■□□□□ 0.63
Ttc3O88196 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Ttc3O88196 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19■□□□□ 0.63
Ttc3O88196 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc3O88196 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ttc3O88196 Odf3b-204ENSMUST00000227834 930 ntBASIC19■□□□□ 0.63
Ttc3O88196 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc3O88196 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ttc3O88196 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc3O88196 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ttc3O88196 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc3O88196 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc3O88196 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.99■□□□□ 0.63
Ttc3O88196 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.99■□□□□ 0.63
Ttc3O88196 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc3O88196 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc3O88196 Iqck-206ENSMUST00000208658 2891 ntBASIC18.99■□□□□ 0.63
Ttc3O88196 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ttc3O88196 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc3O88196 Gm12085-201ENSMUST00000119263 940 ntBASIC18.99■□□□□ 0.63
Ttc3O88196 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.99■□□□□ 0.63
Ttc3O88196 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ttc3O88196 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc3O88196 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc3O88196 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc3O88196 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc3O88196 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc3O88196 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc3O88196 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc3O88196 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Ttc3O88196 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc3O88196 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc3O88196 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Ttc3O88196 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Gm7889-201ENSMUST00000185591 958 ntBASIC18.97■□□□□ 0.63
Ttc3O88196 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.97■□□□□ 0.63
Ttc3O88196 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.97■□□□□ 0.63
Ttc3O88196 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ttc3O88196 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc3O88196 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc3O88196 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc3O88196 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc3O88196 Gm13559-201ENSMUST00000120476 863 ntBASIC18.96■□□□□ 0.63
Ttc3O88196 Gm10231-201ENSMUST00000181584 441 ntBASIC18.96■□□□□ 0.63
Ttc3O88196 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc3O88196 Gm10175-202ENSMUST00000208752 441 ntBASIC18.96■□□□□ 0.63
Ttc3O88196 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ttc3O88196 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc3O88196 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Ttc3O88196 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc3O88196 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ttc3O88196 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ttc3O88196 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ttc3O88196 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ttc3O88196 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ttc3O88196 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms