Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sptlc1O35704 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.77■□□□□ 0.76
Sptlc1O35704 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sptlc1O35704 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sptlc1O35704 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sptlc1O35704 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sptlc1O35704 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sptlc1O35704 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sptlc1O35704 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.76■□□□□ 0.75
Sptlc1O35704 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sptlc1O35704 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sptlc1O35704 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sptlc1O35704 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Sptlc1O35704 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sptlc1O35704 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sptlc1O35704 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sptlc1O35704 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sptlc1O35704 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sptlc1O35704 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Mir2861-201ENSMUST00000175539 82 ntBASIC19.75■□□□□ 0.75
Sptlc1O35704 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sptlc1O35704 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.75■□□□□ 0.75
Sptlc1O35704 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.75■□□□□ 0.75
Sptlc1O35704 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.75■□□□□ 0.75
Sptlc1O35704 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
Sptlc1O35704 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sptlc1O35704 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.75■□□□□ 0.75
Sptlc1O35704 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptlc1O35704 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.74■□□□□ 0.75
Sptlc1O35704 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Gm3375-201ENSMUST00000203929 796 ntBASIC19.74■□□□□ 0.75
Sptlc1O35704 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sptlc1O35704 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptlc1O35704 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Sptlc1O35704 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.73■□□□□ 0.75
Sptlc1O35704 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.73■□□□□ 0.75
Sptlc1O35704 Timm23-208ENSMUST00000226683 750 ntBASIC19.73■□□□□ 0.75
Sptlc1O35704 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptlc1O35704 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptlc1O35704 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sptlc1O35704 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptlc1O35704 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.73■□□□□ 0.75
Sptlc1O35704 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sptlc1O35704 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptlc1O35704 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptlc1O35704 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptlc1O35704 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptlc1O35704 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptlc1O35704 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.72■□□□□ 0.75
Sptlc1O35704 Gm11539-201ENSMUST00000119837 557 ntBASIC19.72■□□□□ 0.75
Sptlc1O35704 Gm13436-201ENSMUST00000120418 567 ntBASIC19.72■□□□□ 0.75
Sptlc1O35704 Gm13559-201ENSMUST00000120476 863 ntBASIC19.72■□□□□ 0.75
Sptlc1O35704 BC021767-201ENSMUST00000126387 1716 ntBASIC19.72■□□□□ 0.75
Sptlc1O35704 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.72■□□□□ 0.75
Sptlc1O35704 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.72■□□□□ 0.75
Sptlc1O35704 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.72■□□□□ 0.75
Sptlc1O35704 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptlc1O35704 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptlc1O35704 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.72■□□□□ 0.75
Sptlc1O35704 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptlc1O35704 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptlc1O35704 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptlc1O35704 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sptlc1O35704 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sptlc1O35704 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptlc1O35704 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptlc1O35704 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sptlc1O35704 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptlc1O35704 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sptlc1O35704 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptlc1O35704 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptlc1O35704 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.71■□□□□ 0.75
Sptlc1O35704 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sptlc1O35704 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Sptlc1O35704 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptlc1O35704 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptlc1O35704 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptlc1O35704 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms