Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1i3O35627 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.4■□□□□ 0.7
Nr1i3O35627 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.4■□□□□ 0.7
Nr1i3O35627 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.4■□□□□ 0.7
Nr1i3O35627 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.4■□□□□ 0.7
Nr1i3O35627 AV356131-201ENSMUST00000206201 750 ntBASIC19.4■□□□□ 0.7
Nr1i3O35627 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.4■□□□□ 0.7
Nr1i3O35627 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1i3O35627 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nr1i3O35627 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.4■□□□□ 0.7
Nr1i3O35627 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nr1i3O35627 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nr1i3O35627 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nr1i3O35627 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nr1i3O35627 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1i3O35627 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.39■□□□□ 0.69
Nr1i3O35627 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1i3O35627 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1i3O35627 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.39■□□□□ 0.69
Nr1i3O35627 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1i3O35627 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.39■□□□□ 0.69
Nr1i3O35627 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1i3O35627 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Nr1i3O35627 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.39■□□□□ 0.69
Nr1i3O35627 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1i3O35627 Gm5874-201ENSMUST00000096101 508 ntBASIC19.39■□□□□ 0.69
Nr1i3O35627 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.39■□□□□ 0.69
Nr1i3O35627 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nr1i3O35627 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Nr1i3O35627 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1i3O35627 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.39■□□□□ 0.69
Nr1i3O35627 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.38■□□□□ 0.69
Nr1i3O35627 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1i3O35627 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.38■□□□□ 0.69
Nr1i3O35627 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.38■□□□□ 0.69
Nr1i3O35627 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.38■□□□□ 0.69
Nr1i3O35627 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.38■□□□□ 0.69
Nr1i3O35627 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1i3O35627 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.38■□□□□ 0.69
Nr1i3O35627 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1i3O35627 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1i3O35627 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1i3O35627 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1i3O35627 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1i3O35627 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.38■□□□□ 0.69
Nr1i3O35627 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Nr1i3O35627 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.38■□□□□ 0.69
Nr1i3O35627 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1i3O35627 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1i3O35627 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1i3O35627 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1i3O35627 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1i3O35627 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nr1i3O35627 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nr1i3O35627 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.37■□□□□ 0.69
Nr1i3O35627 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1i3O35627 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1i3O35627 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1i3O35627 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1i3O35627 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.37■□□□□ 0.69
Nr1i3O35627 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.36■□□□□ 0.69
Nr1i3O35627 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.36■□□□□ 0.69
Nr1i3O35627 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.36■□□□□ 0.69
Nr1i3O35627 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.36■□□□□ 0.69
Nr1i3O35627 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.36■□□□□ 0.69
Nr1i3O35627 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nr1i3O35627 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.36■□□□□ 0.69
Nr1i3O35627 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1i3O35627 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nr1i3O35627 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.35■□□□□ 0.69
Nr1i3O35627 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nr1i3O35627 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.35■□□□□ 0.69
Nr1i3O35627 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1i3O35627 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nr1i3O35627 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms