Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1O35604 Gm2399-201ENSMUST00000104944 225 ntBASIC17.62■□□□□ 0.41
Npc1O35604 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Npc1O35604 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.62■□□□□ 0.41
Npc1O35604 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1O35604 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1O35604 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1O35604 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1O35604 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Npc1O35604 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.61■□□□□ 0.41
Npc1O35604 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Npc1O35604 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Npc1O35604 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.61■□□□□ 0.41
Npc1O35604 Flg-201ENSMUST00000050758 1488 ntBASIC17.61■□□□□ 0.41
Npc1O35604 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1O35604 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1O35604 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1O35604 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.6■□□□□ 0.41
Npc1O35604 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1O35604 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1O35604 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1O35604 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1O35604 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1O35604 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.6■□□□□ 0.41
Npc1O35604 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Npc1O35604 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1O35604 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.6■□□□□ 0.41
Npc1O35604 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Npc1O35604 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.6■□□□□ 0.41
Npc1O35604 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1O35604 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Gm22240-201ENSMUST00000175225 82 ntBASIC17.59■□□□□ 0.41
Npc1O35604 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1O35604 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1O35604 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1O35604 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1O35604 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.58■□□□□ 0.41
Npc1O35604 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1O35604 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1O35604 Gm13168-201ENSMUST00000121771 632 ntBASIC17.58■□□□□ 0.4
Npc1O35604 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1O35604 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1O35604 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1O35604 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Npc1O35604 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Npc1O35604 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.58■□□□□ 0.4
Npc1O35604 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1O35604 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1O35604 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Npc1O35604 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.57■□□□□ 0.4
Npc1O35604 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1O35604 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.56■□□□□ 0.4
Npc1O35604 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Npc1O35604 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Npc1O35604 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms