Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sgo2bJ3QMK1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sgo2bJ3QMK1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sgo2bJ3QMK1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Gm7290-201ENSMUST00000104990 617 ntBASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Gm12918-201ENSMUST00000120234 636 ntBASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Gm15710-201ENSMUST00000121821 636 ntBASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Gm5075-201ENSMUST00000196916 622 ntBASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sgo2bJ3QMK1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Gm6211-202ENSMUST00000167849 925 ntBASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sgo2bJ3QMK1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sgo2bJ3QMK1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms