Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Gm27389-201ENSMUST00000183622 195 ntBASIC17.24■□□□□ 0.35
Colca2F8VPY8 Gm28033-201ENSMUST00000184224 96 ntBASIC17.24■□□□□ 0.35
Colca2F8VPY8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.24■□□□□ 0.35
Colca2F8VPY8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.23■□□□□ 0.35
Colca2F8VPY8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Gm7791-201ENSMUST00000219066 539 ntBASIC17.23■□□□□ 0.35
Colca2F8VPY8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Colca2F8VPY8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Gm7638-201ENSMUST00000121348 967 ntBASIC17.22■□□□□ 0.35
Colca2F8VPY8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Colca2F8VPY8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Mir1668-201ENSMUST00000184114 107 ntBASIC17.21■□□□□ 0.35
Colca2F8VPY8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.21■□□□□ 0.35
Colca2F8VPY8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.21■□□□□ 0.35
Colca2F8VPY8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.2■□□□□ 0.34
Colca2F8VPY8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Colca2F8VPY8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.2■□□□□ 0.34
Colca2F8VPY8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Colca2F8VPY8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Gm17807-201ENSMUST00000186869 298 ntBASIC17.2■□□□□ 0.34
Colca2F8VPY8 Gm7370-201ENSMUST00000219471 767 ntBASIC17.2■□□□□ 0.34
Colca2F8VPY8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Colca2F8VPY8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Colca2F8VPY8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.19■□□□□ 0.34
Colca2F8VPY8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colca2F8VPY8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Colca2F8VPY8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.19■□□□□ 0.34
Colca2F8VPY8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.19■□□□□ 0.34
Colca2F8VPY8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Colca2F8VPY8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colca2F8VPY8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Colca2F8VPY8 Gm24841-201ENSMUST00000158676 357 ntBASIC17.18■□□□□ 0.34
Colca2F8VPY8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Colca2F8VPY8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.18■□□□□ 0.34
Colca2F8VPY8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colca2F8VPY8 Gm7461-201ENSMUST00000058918 827 ntBASIC17.18■□□□□ 0.34
Colca2F8VPY8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colca2F8VPY8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colca2F8VPY8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Colca2F8VPY8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colca2F8VPY8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms