Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Herc1E9PZP8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Zfp783-201ENSMUST00000095946 670 ntBASIC10.24□□□□□ -0.77
Herc1E9PZP8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Gm23547-201ENSMUST00000158210 271 ntBASIC10.24□□□□□ -0.77
Herc1E9PZP8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.24□□□□□ -0.77
Herc1E9PZP8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.24□□□□□ -0.77
Herc1E9PZP8 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.24□□□□□ -0.77
Herc1E9PZP8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Herc1E9PZP8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.23□□□□□ -0.77
Herc1E9PZP8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.23□□□□□ -0.77
Herc1E9PZP8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Herc1E9PZP8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.22□□□□□ -0.77
Herc1E9PZP8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Herc1E9PZP8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Herc1E9PZP8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Herc1E9PZP8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Herc1E9PZP8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Herc1E9PZP8 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.21□□□□□ -0.77
Herc1E9PZP8 Mir6956-201ENSMUST00000183598 62 ntBASIC10.21□□□□□ -0.77
Herc1E9PZP8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.21□□□□□ -0.77
Herc1E9PZP8 Il3ra-202ENSMUST00000223589 738 ntBASIC10.21□□□□□ -0.77
Herc1E9PZP8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Herc1E9PZP8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Herc1E9PZP8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Herc1E9PZP8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Herc1E9PZP8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.21□□□□□ -0.78
Herc1E9PZP8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC10.21□□□□□ -0.78
Herc1E9PZP8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Herc1E9PZP8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Herc1E9PZP8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.21□□□□□ -0.78
Herc1E9PZP8 Gm27397-201ENSMUST00000184997 107 ntBASIC10.21□□□□□ -0.78
Herc1E9PZP8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Herc1E9PZP8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Herc1E9PZP8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Herc1E9PZP8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Herc1E9PZP8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Herc1E9PZP8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Herc1E9PZP8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Herc1E9PZP8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms