Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Gm38285-201ENSMUST00000192928 922 ntBASIC16.14■□□□□ 0.17
Shank1D3YZU1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.14■□□□□ 0.17
Shank1D3YZU1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank1D3YZU1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Shank1D3YZU1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Gm7284-201ENSMUST00000131667 944 ntBASIC16.13■□□□□ 0.17
Shank1D3YZU1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank1D3YZU1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shank1D3YZU1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Shank1D3YZU1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Shank1D3YZU1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Shank1D3YZU1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.1■□□□□ 0.17
Shank1D3YZU1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.1■□□□□ 0.17
Shank1D3YZU1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Shank1D3YZU1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shank1D3YZU1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.09■□□□□ 0.17
Shank1D3YZU1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.09■□□□□ 0.17
Shank1D3YZU1 Gm12085-201ENSMUST00000119263 940 ntBASIC16.09■□□□□ 0.17
Shank1D3YZU1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms