Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Syce3B5KM66 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.69■□□□□ 0.9
Syce3B5KM66 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Syce3B5KM66 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syce3B5KM66 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Syce3B5KM66 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syce3B5KM66 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syce3B5KM66 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syce3B5KM66 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syce3B5KM66 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Syce3B5KM66 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Syce3B5KM66 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syce3B5KM66 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.68■□□□□ 0.9
Syce3B5KM66 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syce3B5KM66 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.68■□□□□ 0.9
Syce3B5KM66 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.68■□□□□ 0.9
Syce3B5KM66 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.68■□□□□ 0.9
Syce3B5KM66 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Syce3B5KM66 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Syce3B5KM66 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syce3B5KM66 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syce3B5KM66 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Syce3B5KM66 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.67■□□□□ 0.9
Syce3B5KM66 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.67■□□□□ 0.9
Syce3B5KM66 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.67■□□□□ 0.9
Syce3B5KM66 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.67■□□□□ 0.9
Syce3B5KM66 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Syce3B5KM66 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Syce3B5KM66 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syce3B5KM66 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syce3B5KM66 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syce3B5KM66 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syce3B5KM66 Smad6-203ENSMUST00000179458 273 ntBASIC20.66■□□□□ 0.9
Syce3B5KM66 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.66■□□□□ 0.9
Syce3B5KM66 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Syce3B5KM66 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syce3B5KM66 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Syce3B5KM66 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.66■□□□□ 0.9
Syce3B5KM66 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syce3B5KM66 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Syce3B5KM66 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syce3B5KM66 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Syce3B5KM66 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.65■□□□□ 0.9
Syce3B5KM66 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.65■□□□□ 0.9
Syce3B5KM66 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Syce3B5KM66 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Syce3B5KM66 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Syce3B5KM66 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Syce3B5KM66 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Syce3B5KM66 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Syce3B5KM66 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Syce3B5KM66 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Syce3B5KM66 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Syce3B5KM66 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Syce3B5KM66 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.64■□□□□ 0.89
Syce3B5KM66 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.64■□□□□ 0.89
Syce3B5KM66 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.64■□□□□ 0.89
Syce3B5KM66 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syce3B5KM66 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.64■□□□□ 0.89
Syce3B5KM66 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Syce3B5KM66 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syce3B5KM66 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syce3B5KM66 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms