Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.74■□□□□ 0.59
Col4a6B1AVK5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.74■□□□□ 0.59
Col4a6B1AVK5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a6B1AVK5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.74■□□□□ 0.59
Col4a6B1AVK5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.74■□□□□ 0.59
Col4a6B1AVK5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a6B1AVK5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a6B1AVK5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a6B1AVK5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Gm16061-201ENSMUST00000122167 857 ntBASIC18.73■□□□□ 0.59
Col4a6B1AVK5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Gm17971-201ENSMUST00000190239 806 ntBASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
Col4a6B1AVK5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a6B1AVK5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a6B1AVK5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a6B1AVK5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a6B1AVK5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col4a6B1AVK5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.72■□□□□ 0.59
Col4a6B1AVK5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a6B1AVK5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a6B1AVK5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a6B1AVK5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a6B1AVK5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a6B1AVK5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Col4a6B1AVK5 Gm22697-201ENSMUST00000175194 63 ntBASIC18.71■□□□□ 0.59
Col4a6B1AVK5 Gm7791-201ENSMUST00000219066 539 ntBASIC18.71■□□□□ 0.59
Col4a6B1AVK5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a6B1AVK5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Col4a6B1AVK5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a6B1AVK5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.7■□□□□ 0.58
Col4a6B1AVK5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a6B1AVK5 Gm7284-201ENSMUST00000131667 944 ntBASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Gm14859-201ENSMUST00000117752 357 ntBASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.69■□□□□ 0.58
Col4a6B1AVK5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a6B1AVK5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms