Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Grk6-206ENSMUST00000224995 2971 ntBASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2aA0A0J9YTW6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Rarb-207ENSMUST00000225921 2756 ntBASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2aA0A0J9YTW6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn2aA0A0J9YTW6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn2aA0A0J9YTW6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn2aA0A0J9YTW6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm22240-201ENSMUST00000175225 82 ntBASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2aA0A0J9YTW6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm8520-201ENSMUST00000186517 868 ntBASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Mtag2-201ENSMUST00000058665 714 ntBASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2aA0A0J9YTW6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2aA0A0J9YTW6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms