Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm5645-201ENSMUST00000179597 714 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm26557-201ENSMUST00000180756 493 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm29111-201ENSMUST00000188823 696 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm28584-201ENSMUST00000191489 696 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm37265-201ENSMUST00000191698 885 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm38138-201ENSMUST00000193274 696 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm37991-201ENSMUST00000194297 696 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm44163-201ENSMUST00000205140 475 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm26442-201ENSMUST00000082588 153 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm14747-201ENSMUST00000149888 984 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Mir1960-201ENSMUST00000157488 78 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm16269-201ENSMUST00000160532 409 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm38237-201ENSMUST00000193366 376 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm44892-201ENSMUST00000208595 488 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm18620-201ENSMUST00000222295 324 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm22581-201ENSMUST00000083735 136 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H2afb2S4R1M3 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm22714-201ENSMUST00000116894 78 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm15765-201ENSMUST00000118407 910 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm13183-201ENSMUST00000118615 789 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm14294-201ENSMUST00000119749 751 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms