Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm37380-201ENSMUST00000193752 397 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm44374-201ENSMUST00000199821 140 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm44225-201ENSMUST00000203582 186 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm24173-201ENSMUST00000104130 128 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm12439-201ENSMUST00000117162 365 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm15596-201ENSMUST00000121139 784 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm11107-201ENSMUST00000165414 505 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm18833-201ENSMUST00000173218 862 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm25025-201ENSMUST00000175018 111 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm2225-201ENSMUST00000209570 377 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm18955-201ENSMUST00000223173 649 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm9788-201ENSMUST00000057038 906 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Olfr687-201ENSMUST00000098154 938 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim3Q9R1R2 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms