Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm4914-201ENSMUST00000119757 459 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm13593-201ENSMUST00000121329 692 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm5853-201ENSMUST00000197183 632 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm44361-201ENSMUST00000197960 94 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm29778-201ENSMUST00000201667 466 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm43906-201ENSMUST00000203194 906 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm45626-201ENSMUST00000210093 361 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm4556-201ENSMUST00000217808 355 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm46364-201ENSMUST00000218548 319 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm8855-201ENSMUST00000118888 878 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm15786-201ENSMUST00000121079 450 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm23553-201ENSMUST00000157817 295 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm20454-201ENSMUST00000172713 221 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm21839-201ENSMUST00000179536 378 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm43744-201ENSMUST00000196387 688 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm17824-201ENSMUST00000197690 805 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm32158-201ENSMUST00000200135 404 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm36378-201ENSMUST00000201709 388 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm19764-201ENSMUST00000203630 649 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Gm7769-201ENSMUST00000212900 933 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Mir3068-201ENSMUST00000083004 136 ntBASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lima1Q9ERG0 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms