Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm11972-201ENSMUST00000118514 389 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm8430-201ENSMUST00000119780 471 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm15103-201ENSMUST00000119893 871 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm11498-201ENSMUST00000120660 949 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm26023-201ENSMUST00000122722 313 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm5456-201ENSMUST00000170706 844 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm4207-201ENSMUST00000173144 960 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm17045-201ENSMUST00000178600 844 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm26587-201ENSMUST00000180795 989 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm27970-201ENSMUST00000184854 407 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm6887-201ENSMUST00000080945 482 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Mir106b-201ENSMUST00000083580 82 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ddx56Q9D0R4 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm2178-201ENSMUST00000104927 357 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm15007-201ENSMUST00000119982 710 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm15194-201ENSMUST00000120453 434 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm14038-201ENSMUST00000121500 807 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm5125-201ENSMUST00000148614 624 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm20432-201ENSMUST00000173716 250 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Mir7005-201ENSMUST00000185089 69 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm28846-201ENSMUST00000189161 368 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm18849-201ENSMUST00000189861 560 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm20776-201ENSMUST00000189940 700 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm44604-201ENSMUST00000205475 496 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm45689-201ENSMUST00000210522 133 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms