Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm13176-201ENSMUST00000117910 477 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm5793-201ENSMUST00000119393 630 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm14840-201ENSMUST00000122135 594 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm15164-201ENSMUST00000122203 271 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Mir1953-201ENSMUST00000157866 89 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm18808-201ENSMUST00000173316 462 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Mir6348-201ENSMUST00000183804 120 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm21877-201ENSMUST00000185640 694 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm19030-201ENSMUST00000194947 552 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm43772-201ENSMUST00000202052 379 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm43895-201ENSMUST00000203219 855 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm5324-201ENSMUST00000208115 476 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm45246-201ENSMUST00000210820 367 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm4556-201ENSMUST00000217808 355 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm15500-201ENSMUST00000071523 894 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm23058-201ENSMUST00000093703 107 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Rnu11-201ENSMUST00000104135 134 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm14755-201ENSMUST00000118037 384 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm14870-201ENSMUST00000118414 156 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm12229-201ENSMUST00000120487 468 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm15596-201ENSMUST00000121139 784 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm8648-201ENSMUST00000122457 221 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm8089-201ENSMUST00000122463 968 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm23426-201ENSMUST00000122483 318 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm11107-201ENSMUST00000165414 505 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm25675-201ENSMUST00000174979 118 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm25244-201ENSMUST00000178089 132 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms