Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Gm37102-201ENSMUST00000195740 1105 ntBASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.14□□□□□ -1.43
Ccdc28bQ8CEG5 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm25415-201ENSMUST00000104220 132 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm22885-201ENSMUST00000157410 107 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm26182-201ENSMUST00000157688 116 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm24130-201ENSMUST00000158536 151 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm8032-201ENSMUST00000171009 574 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm4308-201ENSMUST00000179735 914 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm6562-201ENSMUST00000221903 464 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm6054-201ENSMUST00000078052 378 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm25189-201ENSMUST00000083911 164 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm17165-201ENSMUST00000096155 493 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Ccdc28bQ8CEG5 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm26422-201ENSMUST00000104276 132 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm24989-201ENSMUST00000104461 88 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm11858-201ENSMUST00000117935 838 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm3810-201ENSMUST00000122413 476 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm24186-201ENSMUST00000157983 127 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm26037-201ENSMUST00000158150 311 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm7651-201ENSMUST00000173398 901 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm27360-201ENSMUST00000183487 80 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm27295-201ENSMUST00000184264 153 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm18447-201ENSMUST00000187501 307 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm43744-201ENSMUST00000196387 688 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm36378-201ENSMUST00000201709 388 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC6.12□□□□□ -1.43
Ccdc28bQ8CEG5 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms