Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Mir7037-201ENSMUST00000184414 65 ntBASIC8.72□□□□□ -1.01
Usp47Q8BY87 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC8.72□□□□□ -1.01
Usp47Q8BY87 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Usp47Q8BY87 AC164302.1-201ENSMUST00000227036 433 ntBASIC8.72□□□□□ -1.01
Usp47Q8BY87 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Usp47Q8BY87 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Usp47Q8BY87 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.71□□□□□ -1.01
Usp47Q8BY87 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Usp47Q8BY87 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.71□□□□□ -1.01
Usp47Q8BY87 AC158595.1-201ENSMUST00000217989 1435 ntBASIC8.71□□□□□ -1.01
Usp47Q8BY87 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Usp47Q8BY87 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Usp47Q8BY87 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usp47Q8BY87 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.71□□□□□ -1.02
Usp47Q8BY87 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Gm23050-201ENSMUST00000158775 165 ntBASIC8.71□□□□□ -1.02
Usp47Q8BY87 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC8.71□□□□□ -1.02
Usp47Q8BY87 Gm26057-201ENSMUST00000178099 165 ntBASIC8.71□□□□□ -1.02
Usp47Q8BY87 Ighv1-45-201ENSMUST00000193677 352 ntBASIC8.71□□□□□ -1.02
Usp47Q8BY87 Ighv1-27-201ENSMUST00000194473 340 ntBASIC8.71□□□□□ -1.02
Usp47Q8BY87 Gm36939-201ENSMUST00000194889 439 ntBASIC8.71□□□□□ -1.02
Usp47Q8BY87 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.71□□□□□ -1.02
Usp47Q8BY87 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usp47Q8BY87 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm8401-201ENSMUST00000120248 1739 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm11885-201ENSMUST00000118473 1428 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm18878-201ENSMUST00000223071 1443 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm43503-201ENSMUST00000200033 3408 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm14895-201ENSMUST00000121858 1361 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm42894-201ENSMUST00000200788 3390 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm12099-201ENSMUST00000118660 750 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm13493-201ENSMUST00000120318 493 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm15237-201ENSMUST00000122104 469 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm25433-201ENSMUST00000158283 286 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm26923-201ENSMUST00000182615 996 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Mir7211-201ENSMUST00000184071 63 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm32158-201ENSMUST00000200135 404 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 CT010431.1-201ENSMUST00000221249 1080 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 AC159208.1-201ENSMUST00000221403 649 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm5612-201ENSMUST00000053326 375 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm8526-201ENSMUST00000079153 475 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Usp47Q8BY87 AC154630.1-201ENSMUST00000215334 2440 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp47Q8BY87 Gm38096-201ENSMUST00000193692 2389 ntBASIC8.7□□□□□ -1.02
Usp47Q8BY87 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp47Q8BY87 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm18880-201ENSMUST00000223333 1541 ntBASIC8.69□□□□□ -1.02
Usp47Q8BY87 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC8.69□□□□□ -1.02
Usp47Q8BY87 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 n-R5s19-201ENSMUST00000122793 120 ntBASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Mir6992-201ENSMUST00000183342 109 ntBASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm27460-201ENSMUST00000184213 100 ntBASIC8.69□□□□□ -1.02
Usp47Q8BY87 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms