Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm12540-201ENSMUST00000121938 319 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm14847-201ENSMUST00000121978 519 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm12175-201ENSMUST00000122081 345 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm8089-201ENSMUST00000122463 968 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm7613-201ENSMUST00000139070 487 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm23632-201ENSMUST00000175289 125 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm27185-201ENSMUST00000184296 247 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm27782-201ENSMUST00000185059 199 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm9504-201ENSMUST00000196322 468 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm9788-201ENSMUST00000057038 906 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Mir425-201ENSMUST00000083645 85 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm12813-201ENSMUST00000119615 902 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm22915-201ENSMUST00000157615 136 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm6434-201ENSMUST00000163316 372 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm18833-201ENSMUST00000173218 862 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Mir6367-201ENSMUST00000183385 102 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm7019-201ENSMUST00000194122 369 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm2225-201ENSMUST00000209570 377 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc40Q8BI79 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms