Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 AC149294.7-201ENSMUST00000227475 1432 ntBASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scaf4Q6PFF0 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm12874-201ENSMUST00000117190 913 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm14607-201ENSMUST00000119119 491 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm24840-201ENSMUST00000122603 147 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm15843-201ENSMUST00000146593 529 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm23897-201ENSMUST00000158110 158 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm27163-201ENSMUST00000184767 409 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm5261-201ENSMUST00000185860 713 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm28958-201ENSMUST00000185864 703 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm37716-201ENSMUST00000193553 947 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm29815-201ENSMUST00000202418 178 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm42883-201ENSMUST00000202594 222 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm18781-201ENSMUST00000211252 924 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 AC166358.6-201ENSMUST00000221834 1206 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 AC110380.1-201ENSMUST00000226987 389 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 AC144628.1-201ENSMUST00000227943 466 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.72□□□□□ -1.33
Scaf4Q6PFF0 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scaf4Q6PFF0 Thap6-201ENSMUST00000191860 3151 ntBASIC6.71□□□□□ -1.33
Scaf4Q6PFF0 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Scaf4Q6PFF0 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Scaf4Q6PFF0 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Scaf4Q6PFF0 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scaf4Q6PFF0 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
Scaf4Q6PFF0 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm25313-201ENSMUST00000101817 116 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm22152-201ENSMUST00000116966 125 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm11854-201ENSMUST00000117839 446 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm8534-201ENSMUST00000118553 766 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm12321-201ENSMUST00000121485 804 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm13221-201ENSMUST00000121712 430 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm26480-201ENSMUST00000122619 297 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm23287-201ENSMUST00000179427 116 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm23143-201ENSMUST00000180137 116 ntBASIC6.71□□□□□ -1.34
Scaf4Q6PFF0 Gm9167-201ENSMUST00000182469 962 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms