Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.81□□□□□ -1.48
Spg11Q3UHA3 AC132587.1-201ENSMUST00000220562 166 ntBASIC5.81□□□□□ -1.48
Spg11Q3UHA3 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.81□□□□□ -1.48
Spg11Q3UHA3 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Mir31-201ENSMUST00000083474 106 ntBASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Gm45112-201ENSMUST00000208576 5125 ntBASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.81□□□□□ -1.48
Spg11Q3UHA3 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.81□□□□□ -1.48
Spg11Q3UHA3 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm15709-201ENSMUST00000118354 213 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm28413-201ENSMUST00000189369 291 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm42522-201ENSMUST00000196071 255 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm43212-201ENSMUST00000198208 394 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm18413-201ENSMUST00000221573 655 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm44620-201ENSMUST00000209183 2887 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm14970-201ENSMUST00000122289 355 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm24940-201ENSMUST00000158326 108 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Mir6367-201ENSMUST00000183385 102 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm3189-201ENSMUST00000205595 832 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 AC134860.6-201ENSMUST00000226038 285 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 AC140280.1-201ENSMUST00000227826 1847 ntBASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Spg11Q3UHA3 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm37745-201ENSMUST00000193304 8163 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm14783-201ENSMUST00000118900 663 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm13998-201ENSMUST00000120952 335 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm15171-201ENSMUST00000122191 334 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm20545-201ENSMUST00000174739 210 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm28266-201ENSMUST00000191410 439 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm37770-201ENSMUST00000192855 772 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm24200-201ENSMUST00000082955 157 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 AC164437.5-201ENSMUST00000227235 4414 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 CT009757.6-201ENSMUST00000220661 2312 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Gm44950-201ENSMUST00000206403 2296 ntBASIC5.79□□□□□ -1.48
Spg11Q3UHA3 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms