Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm37902-201ENSMUST00000192839 1683 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm16221-201ENSMUST00000117331 393 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm5390-201ENSMUST00000119069 1230 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm14580-201ENSMUST00000119122 718 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm11866-201ENSMUST00000120209 335 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm13532-201ENSMUST00000120373 240 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm13459-201ENSMUST00000121558 646 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm12152-201ENSMUST00000122465 684 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm25969-201ENSMUST00000157166 132 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm23022-201ENSMUST00000158768 180 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm17212-201ENSMUST00000166666 259 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm22132-201ENSMUST00000175316 100 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Mir7674-201ENSMUST00000184964 63 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28739-201ENSMUST00000185415 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28219-201ENSMUST00000185452 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28542-201ENSMUST00000185545 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28303-201ENSMUST00000185642 747 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29244-201ENSMUST00000185825 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29437-201ENSMUST00000185865 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29412-201ENSMUST00000185869 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28910-201ENSMUST00000185921 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28812-201ENSMUST00000185963 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29468-201ENSMUST00000185978 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28854-201ENSMUST00000186218 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28636-201ENSMUST00000186353 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28452-201ENSMUST00000186623 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29298-201ENSMUST00000186704 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28185-201ENSMUST00000186815 694 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28227-201ENSMUST00000186862 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28796-201ENSMUST00000186905 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29659-201ENSMUST00000187063 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28473-201ENSMUST00000187325 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28682-201ENSMUST00000187430 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28738-201ENSMUST00000187480 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28949-201ENSMUST00000187805 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28773-201ENSMUST00000187925 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29319-201ENSMUST00000188060 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29422-201ENSMUST00000188062 694 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28787-201ENSMUST00000188357 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29312-201ENSMUST00000188724 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29451-201ENSMUST00000188862 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29637-201ENSMUST00000188877 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29033-201ENSMUST00000189114 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29614-201ENSMUST00000189263 694 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28751-201ENSMUST00000189287 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29559-201ENSMUST00000189412 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28272-201ENSMUST00000189512 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28483-201ENSMUST00000189519 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28123-201ENSMUST00000189725 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28368-201ENSMUST00000189804 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29119-201ENSMUST00000189973 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28716-201ENSMUST00000190217 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29239-201ENSMUST00000190304 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28837-201ENSMUST00000190397 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28531-201ENSMUST00000190529 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm28165-201ENSMUST00000190669 694 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm29181-201ENSMUST00000191288 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm32347-201ENSMUST00000192944 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm37404-201ENSMUST00000195726 359 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm37990-201ENSMUST00000195821 696 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm37908-201ENSMUST00000195828 470 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms