Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm12040-201ENSMUST00000118357 537 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Gm25605-201ENSMUST00000158364 124 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm37421-201ENSMUST00000193088 132 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Gm38291-201ENSMUST00000193671 259 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Gm36448-201ENSMUST00000199916 438 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 AC167222.2-201ENSMUST00000220014 295 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 AC091783.2-201ENSMUST00000224626 740 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Nup210l-201ENSMUST00000029548 5681 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm37663-201ENSMUST00000191887 2299 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm14842-201ENSMUST00000119577 269 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Gm5387-201ENSMUST00000119776 857 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Gm37103-201ENSMUST00000191830 115 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm8523-201ENSMUST00000211386 552 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 AC164302.1-201ENSMUST00000227036 433 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Gm22741-201ENSMUST00000083438 165 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PrkdcP97313 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 AC156025.3-201ENSMUST00000225919 3095 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Mir3104-201ENSMUST00000174911 63 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm4822-201ENSMUST00000077551 479 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PrkdcP97313 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
PrkdcP97313 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Gm42972-201ENSMUST00000196937 5617 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
PrkdcP97313 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PrkdcP97313 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 AC159006.2-201ENSMUST00000228734 4144 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm7309-201ENSMUST00000121670 581 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm11545-201ENSMUST00000146507 375 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm27760-201ENSMUST00000185048 114 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm20954-201ENSMUST00000189078 644 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Gm44111-201ENSMUST00000204649 399 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm46191-201ENSMUST00000218899 433 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PrkdcP97313 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC4.11□□□□□ -1.75
PrkdcP97313 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 AC135119.1-202ENSMUST00000228435 2203 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 AC151984.1-201ENSMUST00000218261 2976 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Cc2d2a-201ENSMUST00000048150 5484 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 AC162936.1-201ENSMUST00000223676 2368 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PrkdcP97313 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PrkdcP97313 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Gm13000-201ENSMUST00000120937 496 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm26357-201ENSMUST00000158218 115 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.11□□□□□ -1.75
PrkdcP97313 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Vis1-201ENSMUST00000183957 201 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm37908-201ENSMUST00000195828 470 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm43919-201ENSMUST00000204303 364 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PrkdcP97313 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms