Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.5□□□□□ -1.53
Lsm6P62313 Gm7554-201ENSMUST00000202282 574 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 Gm21048-201ENSMUST00000202470 1166 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 Gm44075-201ENSMUST00000204208 216 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 Gm44279-201ENSMUST00000205154 472 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 Gm44837-201ENSMUST00000206863 717 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 Gm6070-201ENSMUST00000207275 419 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 Gm18559-201ENSMUST00000208249 604 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 Gm29486-201ENSMUST00000088648 372 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Lsm6P62313 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm6P62313 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
Lsm6P62313 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.5□□□□□ -1.53
Lsm6P62313 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm6P62313 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm6P62313 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Lsm6P62313 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm6P62313 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lsm6P62313 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm8250-201ENSMUST00000117398 774 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm14863-201ENSMUST00000119648 307 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm12399-201ENSMUST00000121475 446 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.49□□□□□ -1.53
Lsm6P62313 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm25904-201ENSMUST00000158491 143 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm25989-201ENSMUST00000158761 133 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm11107-201ENSMUST00000165414 505 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lsm6P62313 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm7804-202ENSMUST00000194187 854 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm43744-201ENSMUST00000196387 688 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.49□□□□□ -1.53
Lsm6P62313 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm32158-201ENSMUST00000200135 404 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm18805-201ENSMUST00000206872 655 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.49□□□□□ -1.53
Lsm6P62313 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.49□□□□□ -1.53
Lsm6P62313 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.49□□□□□ -1.53
Lsm6P62313 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Lsm6P62313 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.49□□□□□ -1.53
Lsm6P62313 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm6P62313 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lsm6P62313 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lsm6P62313 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Lsm6P62313 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Lsm6P62313 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms