Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.76□□□□□ -1.49
Cdh11P55288 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh11P55288 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdh11P55288 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh11P55288 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh11P55288 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh11P55288 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh11P55288 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.76□□□□□ -1.49
Cdh11P55288 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdh11P55288 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh11P55288 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdh11P55288 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdh11P55288 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Cdh11P55288 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdh11P55288 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdh11P55288 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdh11P55288 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm22820-201ENSMUST00000157205 329 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm20691-201ENSMUST00000176889 333 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Gm20615-201ENSMUST00000177503 705 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Gm25244-201ENSMUST00000178089 132 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm26738-201ENSMUST00000181312 601 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Mir6989-201ENSMUST00000184812 65 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm28620-201ENSMUST00000190463 439 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Gm37901-201ENSMUST00000195107 514 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm2225-201ENSMUST00000209570 377 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Gm18620-201ENSMUST00000222295 324 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Gm6575-201ENSMUST00000222946 697 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdh11P55288 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.75□□□□□ -1.49
Cdh11P55288 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdh11P55288 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdh11P55288 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Cdh11P55288 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdh11P55288 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdh11P55288 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.75□□□□□ -1.49
Cdh11P55288 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh11P55288 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdh11P55288 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdh11P55288 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdh11P55288 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdh11P55288 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdh11P55288 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Cdh11P55288 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdh11P55288 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdh11P55288 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Cdh11P55288 Gm24790-201ENSMUST00000104285 132 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gm24888-201ENSMUST00000104387 130 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gm13983-201ENSMUST00000118018 865 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gm11925-201ENSMUST00000121375 535 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdh11P55288 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdh11P55288 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdh11P55288 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdh11P55288 Gm22428-201ENSMUST00000158554 132 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdh11P55288 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdh11P55288 Gm37189-201ENSMUST00000192131 298 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gm8860-201ENSMUST00000193160 445 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gm8190-201ENSMUST00000199603 586 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdh11P55288 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.74□□□□□ -1.49
Cdh11P55288 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 Gm5928-201ENSMUST00000221839 466 ntBASIC5.74□□□□□ -1.49
Cdh11P55288 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdh11P55288 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms