Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cux1P53564 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cux1P53564 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Cux1P53564 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cux1P53564 Ap5m1-208ENSMUST00000228238 3514 ntBASIC9.5□□□□□ -0.89
Cux1P53564 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cux1P53564 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cux1P53564 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cux1P53564 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Cux1P53564 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cux1P53564 Gm42873-201ENSMUST00000196110 1726 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cux1P53564 Gm44039-201ENSMUST00000204192 2246 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Gm45290-201ENSMUST00000211177 3890 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cux1P53564 Gm13193-201ENSMUST00000117275 225 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Gm15715-201ENSMUST00000118032 283 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Gm13537-201ENSMUST00000120467 267 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC9.49□□□□□ -0.89
Cux1P53564 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Cux1P53564 Gm29551-201ENSMUST00000190913 698 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Gm18865-201ENSMUST00000193011 1171 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC9.49□□□□□ -0.89
Cux1P53564 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC9.49□□□□□ -0.89
Cux1P53564 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC9.49□□□□□ -0.89
Cux1P53564 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cux1P53564 Gm23502-201ENSMUST00000083902 145 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Gm7155-201ENSMUST00000121143 1671 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cux1P53564 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cux1P53564 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cux1P53564 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cux1P53564 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Cux1P53564 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cux1P53564 Gm4954-201ENSMUST00000135069 1601 ntBASIC9.49□□□□□ -0.89
Cux1P53564 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cux1P53564 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cux1P53564 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC9.49□□□□□ -0.89
Cux1P53564 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Cux1P53564 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC9.48□□□□□ -0.89
Cux1P53564 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC9.48□□□□□ -0.89
Cux1P53564 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cux1P53564 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC9.48□□□□□ -0.89
Cux1P53564 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cux1P53564 Gm25919-201ENSMUST00000104271 132 ntBASIC9.48□□□□□ -0.89
Cux1P53564 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cux1P53564 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cux1P53564 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC9.48□□□□□ -0.89
Cux1P53564 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC9.48□□□□□ -0.89
Cux1P53564 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cux1P53564 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC9.48□□□□□ -0.89
Cux1P53564 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Cux1P53564 Gm27679-201ENSMUST00000184612 84 ntBASIC9.48□□□□□ -0.89
Cux1P53564 Gm28443-201ENSMUST00000189081 698 ntBASIC9.48□□□□□ -0.89
Cux1P53564 Gm28467-201ENSMUST00000190981 318 ntBASIC9.48□□□□□ -0.89
Cux1P53564 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC9.48□□□□□ -0.89
Cux1P53564 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Cux1P53564 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cux1P53564 Gm9202-201ENSMUST00000223036 437 ntBASIC9.48□□□□□ -0.89
Cux1P53564 AC122858.1-201ENSMUST00000226212 433 ntBASIC9.48□□□□□ -0.89
Cux1P53564 AC122858.3-201ENSMUST00000226341 740 ntBASIC9.48□□□□□ -0.89
Cux1P53564 AC122858.1-202ENSMUST00000228290 986 ntBASIC9.48□□□□□ -0.89
Cux1P53564 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Cux1P53564 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cux1P53564 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cux1P53564 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.48□□□□□ -0.89
Cux1P53564 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC9.48□□□□□ -0.89
Cux1P53564 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Cux1P53564 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Cux1P53564 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cux1P53564 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC9.47□□□□□ -0.89
Cux1P53564 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC9.47□□□□□ -0.89
Cux1P53564 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms