Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm26684-202ENSMUST00000228229 8257 ntBASIC6.35□□□□□ -1.39
HttP42859 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC6.35□□□□□ -1.39
HttP42859 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.34□□□□□ -1.39
HttP42859 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Gm6427-201ENSMUST00000118721 979 ntBASIC6.34□□□□□ -1.39
HttP42859 Gm25605-201ENSMUST00000158364 124 ntBASIC6.34□□□□□ -1.39
HttP42859 Mir3104-201ENSMUST00000174911 63 ntBASIC6.34□□□□□ -1.39
HttP42859 Gm37908-201ENSMUST00000195828 470 ntBASIC6.34□□□□□ -1.39
HttP42859 Gm44494-201ENSMUST00000196760 129 ntBASIC6.34□□□□□ -1.39
HttP42859 Gm43973-201ENSMUST00000203562 210 ntBASIC6.34□□□□□ -1.39
HttP42859 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.34□□□□□ -1.39
HttP42859 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
HttP42859 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HttP42859 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.34□□□□□ -1.39
HttP42859 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HttP42859 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.34□□□□□ -1.39
HttP42859 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
HttP42859 Rian-209ENSMUST00000182406 3476 ntBASIC6.34□□□□□ -1.39
HttP42859 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.34□□□□□ -1.39
HttP42859 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.34□□□□□ -1.39
HttP42859 Gm4962-201ENSMUST00000199640 2977 ntBASIC6.34□□□□□ -1.39
HttP42859 Gm35648-201ENSMUST00000202304 475 ntBASIC6.34□□□□□ -1.39
HttP42859 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.34□□□□□ -1.39
HttP42859 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.34□□□□□ -1.39
HttP42859 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.34□□□□□ -1.39
HttP42859 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HttP42859 Gm37648-201ENSMUST00000192072 2563 ntBASIC6.34□□□□□ -1.39
HttP42859 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.34□□□□□ -1.39
HttP42859 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.34□□□□□ -1.39
HttP42859 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HttP42859 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HttP42859 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HttP42859 Grik1-209ENSMUST00000227986 2942 ntBASIC6.34□□□□□ -1.4
HttP42859 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
HttP42859 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.34□□□□□ -1.4
HttP42859 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.34□□□□□ -1.4
HttP42859 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.4
HttP42859 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HttP42859 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.34□□□□□ -1.4
HttP42859 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.34□□□□□ -1.4
HttP42859 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HttP42859 Gm42643-201ENSMUST00000200504 279 ntBASIC6.34□□□□□ -1.4
HttP42859 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HttP42859 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.34□□□□□ -1.4
HttP42859 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
HttP42859 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
HttP42859 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HttP42859 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.34□□□□□ -1.4
HttP42859 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HttP42859 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.34□□□□□ -1.4
HttP42859 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HttP42859 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HttP42859 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Gm22870-201ENSMUST00000157501 112 ntBASIC6.33□□□□□ -1.4
HttP42859 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.33□□□□□ -1.4
HttP42859 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.33□□□□□ -1.4
HttP42859 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HttP42859 Gm7780-201ENSMUST00000214787 406 ntBASIC6.33□□□□□ -1.4
HttP42859 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HttP42859 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
HttP42859 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.33□□□□□ -1.4
HttP42859 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Gm37308-201ENSMUST00000194684 100 ntBASIC6.33□□□□□ -1.4
HttP42859 AC127279.1-201ENSMUST00000220140 637 ntBASIC6.33□□□□□ -1.4
HttP42859 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HttP42859 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HttP42859 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC6.33□□□□□ -1.4
HttP42859 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms